PDB Entry (4cyg) |
||
| ||
PDB ID: 4cyg | Resolution: 2.3 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 25478849 | DOI: 10.1107/S1399004714022767 | |
Protein |
|
Protein Name: Pantetheinase | |
Uniprot ID/ACC: O95497 (VNN1_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: VNN1 | Gene ID: 8876 |
Protein Class: HYDROLASE |
Ligand |
||
Ligand Name: RR6 | ||
Canonical SMILES: OCC(C)(C)[C@@H](O)C(=O)NCCC(=O)Cc1ccccc1 | ||
Standard InChI: InChI=1S/C16H23NO4/c1-16(2,11-18)14(20)15(21)17-9-8-13(19)10-12-6-4-3-5-7-12/h3-7,14,18,20H,8-11H2,1-2H3,(H,17,21)/t14-/m0/s1 | ||
HET Code: RRV | PubChem: 54754611 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C16H23NO4 | Mol. Weight: 293.16272 | logP: 0.6839 |
HBD: 3 | HBA: 4 | |
#Rotatable Bonds: 8 | TPSA: 86.63 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Hemi(thio)acetalization | CYS 211 | B | 12.14 | 13.61 | Ketone |
Binding Affinity |
||
- |