PDB Entry (4cyg)
PDB ID: 4cyg Resolution: 2.3 Å Exp. Method: X-RAY DIFFRACTION
PMID: 25478849 DOI: 10.1107/S1399004714022767
Protein
Protein Name: Pantetheinase
Uniprot ID/ACC: O95497 (VNN1_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: VNN1 Gene ID: 8876
Protein Class: HYDROLASE
Ligand
Ligand Name:   RR6
Canonical SMILES:   OCC(C)(C)[C@@H](O)C(=O)NCCC(=O)Cc1ccccc1
Standard InChI:   InChI=1S/C16H23NO4/c1-16(2,11-18)14(20)15(21)17-9-8-13(19)10-12-6-4-3-5-7-12/h3-7,14,18,20H,8-11H2,1-2H3,(H,17,21)/t14-/m0/s1
HET Code:   RRV PubChem:   54754611
DrugBank:   - ChEMBL:   -
Molecular Formula:   C16H23NO4 Mol. Weight:   293.16272 logP:   0.6839
HBD:   3 HBA:   4
#Rotatable Bonds:   8 TPSA:   86.63
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Hemi(thio)acetalization CYS 211 B 12.14 13.61 Ketone
Binding Affinity
-