PDB Entry (6vua) |
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PDB ID: 6vua | Resolution: 1.5 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 32537509 | DOI: 10.1126/sciadv.aba6752 | |
Protein |
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Protein Name: ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 | |
Uniprot ID/ACC: P28907 (CD38_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: CD38 | Gene ID: 952 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: 2'-Cl-araNAD+ | ||
Canonical SMILES: NC(=O)c1cc[n+](cc1)[C@H]1O[C@H](COP(O)(=O)OP(O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2cnc3c(N)ncnc23)[C@@H](O)[C@@H]1Cl | ||
Standard InChI: InChI=1S/C21H26ClN7O13P2/c22-12-14(30)10(40-20(12)28-3-1-9(2-4-28)18(24)33)5-38-43(34,35)42-44(36,37)39-6-11-15(31)16(32)21(41-11)29-8-27-13-17(23)25-7-26-19(13)29/h1-4,7-8,10-12,14-16,20-21,30-32H,5-6H2,(H5-,23,24,25,26,33,34,35,36,37)/p+1/t10-,11-,12+,14-,15-,16-,20+,21-/m1/s1 | ||
HET Code: ROJ | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C21H27ClN7O13P2+ | Mol. Weight: 682.0825 | logP: -1.7694 |
HBD: 7 | HBA: 16 | |
#Rotatable Bonds: 11 | TPSA: 298.03 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Aliphatic Subsititution | GLU 226 | A | 19.79 | 10.13 | Aminium Ion |
Binding Affinity |
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