PDB Entry (6v6o)
PDB ID: 6v6o Resolution: 2.1 Å Exp. Method: X-RAY DIFFRACTION
PMID: 32243152 DOI: 10.1021/acs.jmedchem.0c00200
Protein
Protein Name: Epidermal growth factor receptor
Uniprot ID/ACC: P00533 (EGFR_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: EGFR Gene ID: 1956
Protein Class: TRANSFERASE
Ligand
Ligand Name:   LN2380
Canonical SMILES:   COc1ccc(NC(=O)C=C)cc1Nc2cc(ccn2)-c3nc(CCCO)[nH]c3-c4ccc(F)cc4
Standard InChI:   InChI=1S/C27H26FN5O3/c1-3-25(35)30-20-10-11-22(36-2)21(16-20)31-24-15-18(12-13-29-24)27-26(17-6-8-19(28)9-7-17)32-23(33-27)5-4-14-34/h3,6-13,15-16,34H,1,4-5,14H2,2H3,(H,29,31)(H,30,35)(H,32,33)
HET Code:   QQM PubChem:   135313938
DrugBank:   - ChEMBL:   CHEMBL4100860
Molecular Formula:   C27H26FN5O3 Mol. Weight:   487.20197 logP:   5.0794
HBD:   4 HBA:   6
#Rotatable Bonds:   10 TPSA:   112.16
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 797 D 22.62 14.22 Vinyl Carbonyl
Binding Affinity
-