PDB Entry (6v6k)
PDB ID: 6v6k Resolution: 2.2 Å Exp. Method: X-RAY DIFFRACTION
PMID: 32243152 DOI: 10.1021/acs.jmedchem.0c00200
Protein
Protein Name: Epidermal growth factor receptor
Uniprot ID/ACC: P00533 (EGFR_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: EGFR Gene ID: 1956
Protein Class: TRANSFERASE
Ligand
Ligand Name:   LN2057
Canonical SMILES:   COc1ccc(NC(=O)C=C)cc1Nc2cc(ccn2)-c3[nH]c(SC)nc3-c4ccc(F)cc4
Standard InChI:   InChI=1S/C25H22FN5O2S/c1-4-22(32)28-18-9-10-20(33-2)19(14-18)29-21-13-16(11-12-27-21)24-23(30-25(31-24)34-3)15-5-7-17(26)8-6-15/h4-14H,1H2,2-3H3,(H,27,29)(H,28,32)(H,30,31)
HET Code:   QQJ PubChem:   134959408
DrugBank:   - ChEMBL:   CHEMBL4098072
Molecular Formula:   C25H22FN5O2S Mol. Weight:   475.14783 logP:   5.8764
HBD:   3 HBA:   6
#Rotatable Bonds:   8 TPSA:   91.93
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 797 D 23.26 12.9 Vinyl Carbonyl
Binding Affinity
-