PDB Entry (2ipp) |
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PDB ID: 2ipp | Resolution: 2.15 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: - | |
Protein |
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Protein Name: Cathepsin B | |
Uniprot ID/ACC: P07858 (CATB_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: CTSB | Gene ID: 1508 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: 2-pyridyl disulfide | ||
Canonical SMILES: n1ccccc1SSc2ncccc2 | ||
Standard InChI: InChI=1S/C10H8N2S2/c1-3-7-11-9(5-1)13-14-10-6-2-4-8-12-10/h1-8H | ||
HET Code: PYS | PubChem: 65093 | |
DrugBank: - | ChEMBL: CHEMBL118678 | |
Molecular Formula: C10H8N2S2 | Mol. Weight: 220.0129 | logP: 3.276 |
HBD: 0 | HBA: 4 | |
#Rotatable Bonds: 3 | TPSA: 25.78 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Disulfide Formation | CYS 29 | A | 17.05 | 99.99 | Disulfide |
Binding Affinity |
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