PDB Entry (3nmi)
PDB ID: 3nmi Resolution: 2.01 Å Exp. Method: X-RAY DIFFRACTION
PMID: 20740227 DOI: 10.1039/c0cc02168g
Protein
Protein Name: Soluble cytochrome b562
Uniprot ID/ACC: P0ABE7 (C562_ECOLX) Organism: Escherichia coli
Gene Symbol: cybC Gene ID: 58390494
Protein Class: OXIDOREDUCTASE
Ligand
Ligand Name:   5-Iodoaceamido-1,10-phenanthroline
Canonical SMILES:   ICC(=O)Nc1cc(cccn2)c2c(c13)nccc3
Standard InChI:   InChI=1S/C14H10IN3O/c15-8-12(19)18-11-7-9-3-1-5-16-13(9)14-10(11)4-2-6-17-14/h1-7H,8H2,(H,18,19)
HET Code:   PXX PubChem:   18785373
DrugBank:   - ChEMBL:   -
Molecular Formula:   C14H10IN3O Mol. Weight:   362.98685 logP:   3.1565
HBD:   1 HBA:   3
#Rotatable Bonds:   2 TPSA:   54.88
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Aliphatic Subsititution CYS 59 A 53.35 15.66 Halomethyl Carbonyl
Binding Affinity
-