PDB Entry (3nmi) |
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PDB ID: 3nmi | Resolution: 2.01 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 20740227 | DOI: 10.1039/c0cc02168g | |
Protein |
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Protein Name: Soluble cytochrome b562 | |
Uniprot ID/ACC: P0ABE7 (C562_ECOLX) | Organism: Escherichia coli |
Gene Symbol: cybC | Gene ID: 58390494 |
Protein Class: OXIDOREDUCTASE |
Ligand |
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Ligand Name: 5-Iodoaceamido-1,10-phenanthroline | ||
Canonical SMILES: ICC(=O)Nc1cc(cccn2)c2c(c13)nccc3 | ||
Standard InChI: InChI=1S/C14H10IN3O/c15-8-12(19)18-11-7-9-3-1-5-16-13(9)14-10(11)4-2-6-17-14/h1-7H,8H2,(H,18,19) | ||
HET Code: PXX | PubChem: 18785373 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C14H10IN3O | Mol. Weight: 362.98685 | logP: 3.1565 |
HBD: 1 | HBA: 3 | |
#Rotatable Bonds: 2 | TPSA: 54.88 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Aliphatic Subsititution | CYS 59 | A | 53.35 | 15.66 | Halomethyl Carbonyl |
Binding Affinity |
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