PDB Entry (3o6t) |
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PDB ID: 3o6t | Resolution: 2.4 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 20981751 | DOI: 10.1002/pro.533 | |
Protein |
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Protein Name: Thioredoxin | |
Uniprot ID/ACC: P9WG67 (THIO_MYCTU) | Organism: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) |
Gene Symbol: trxA | Gene ID: 45427914 |
Protein Class: OXIDOREDUCTASE |
Ligand |
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Ligand Name: PMX464 | ||
Canonical SMILES: c1cccc(c12)sc(n2)C3(O)C=CC(=O)C=C3 | ||
Standard InChI: InChI=1S/C13H9NO2S/c15-9-5-7-13(16,8-6-9)12-14-10-3-1-2-4-11(10)17-12/h1-8,16H | ||
HET Code: PX5 | PubChem: 482697 | |
DrugBank: - | ChEMBL: CHEMBL151831 | |
Molecular Formula: C13H9NO2S | Mol. Weight: 243.0354 | logP: 2.179 |
HBD: 1 | HBA: 4 | |
#Rotatable Bonds: 1 | TPSA: 50.19 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Michael Addition | CYS 37 | A | 22.81 | 10.94 | Vinyl Carbonyl |
Binding Affinity |
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Database Name | Value |
PDBBind | IC50 : 6000 nM |