PDB Entry (2zk2)
PDB ID: 2zk2 Resolution: 2.26 Å Exp. Method: X-RAY DIFFRACTION
PMID: 18977231 DOI: 10.1016/j.jmb.2008.10.039
Protein
Protein Name: Peroxisome proliferator-activated receptor gamma
Uniprot ID/ACC: P37231 (PPARG_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: PPARG Gene ID: 5468
Protein Class: TRANSCRIPTION REGULATOR
Ligand
Ligand Name:   15-deoxy-delta12,14-prostaglandin J2
Canonical SMILES:   CCCCC\C=C\C=C1/[C@@H](C\C=C\CCCC(O)=O)C=CC1=O
Standard InChI:   InChI=1S/C20H28O3/c1-2-3-4-5-6-10-13-18-17(15-16-19(18)21)12-9-7-8-11-14-20(22)23/h6-7,9-10,13,15-17H,2-5,8,11-12,14H2,1H3,(H,22,23)/b9-7+,10-6+,18-13+/t17-/m0/s1
HET Code:   PTG PubChem:   12068863
DrugBank:   - ChEMBL:   -
Molecular Formula:   C20H28O3 Mol. Weight:   316.20386 logP:   5.0056
HBD:   1 HBA:   2
#Rotatable Bonds:   11 TPSA:   54.37
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 285 A 70.43 14.2 Vinyl Carbonyl
Binding Affinity
-