PDB Entry (2h7x) |
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PDB ID: 2h7x | Resolution: 1.85 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 16969373 | DOI: 10.1038/nchembio822 | |
Protein |
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Protein Name: Narbonolide/10-deoxymethynolide synthase PikA4, module 6 | |
Uniprot ID/ACC: Q9ZGI2 (PIKA4_STRVZ) | Organism: Streptomyces venezuelae |
Gene Symbol: pikAIV | Gene ID: - |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: diphenyl {[(4S,5R,6S)-6-ethyl-2,2,5-trimethyl-1,3-dioxan-4-yl]methyl}phosphonate | ||
Canonical SMILES: CC1(C)O[C@@H](CC)[C@@H](C)[C@H](O1)CP(=O)(Oc2ccccc2)Oc3ccccc3 | ||
Standard InChI: InChI=1S/C22H29O5P/c1-5-20-17(2)21(25-22(3,4)24-20)16-28(23,26-18-12-8-6-9-13-18)27-19-14-10-7-11-15-19/h6-15,17,20-21H,5,16H2,1-4H3/t17-,20+,21-/m1/s1 | ||
HET Code: PSX | PubChem: 9543579 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C22H29O5P | Mol. Weight: 404.17526 | logP: 5.9037 |
HBD: 0 | HBA: 5 | |
#Rotatable Bonds: 7 | TPSA: 53.99 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Phosphorylation | SER 148 | A | 33.68 | - | Phosphonate |
Binding Affinity |
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