PDB Entry (1o4k) |
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PDB ID: 1o4k | Resolution: 1.57 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 14613321 | DOI: 10.1021/jm020970s | |
Protein |
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Protein Name: Proto-oncogene tyrosine-protein kinase Src | |
Uniprot ID/ACC: P12931 (SRC_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: SRC | Gene ID: 6714 |
Protein Class: SIGNALING PROTEIN |
Ligand |
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Ligand Name: PASBN | ||
Canonical SMILES: c1ccccc1COP([O-])(=O)Oc2ccccc2C=O | ||
Standard InChI: InChI=1S/C14H13O5P/c15-10-13-8-4-5-9-14(13)19-20(16,17)18-11-12-6-2-1-3-7-12/h1-10H,11H2,(H,16,17)/p-1 | ||
HET Code: PSN | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C14H12O5P- | Mol. Weight: 291.0428 | logP: 2.5631 |
HBD: 0 | HBA: 5 | |
#Rotatable Bonds: 6 | TPSA: 75.66 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Hemi(thio)acetalization | CYS 44 | A | 11.61 | 12.31 | Aldehyde |
Binding Affinity |
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Database Name | Value |
PDBBind | IC50 : 1200000 nM |
BindingDB | IC50 : 1200000 nM |