PDB Entry (4ehm) |
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PDB ID: 4ehm | Resolution: 2.2 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 22480322 | DOI: 10.1021/ja211305j | |
Protein |
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Protein Name: Geranylgeranyl transferase type-2 subunit alpha | |
Uniprot ID/ACC: Q08602 (PGTA_RAT) | Organism: Rattus norvegicus (Rat) |
Gene Symbol: Rabggta | Gene ID: 58983 |
Protein Class: TRANSFERASE |
Ligand |
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Ligand Name: Psoromic acid | ||
Canonical SMILES: COc1cc(C(O)=O)c2Oc3c(C=O)c(O)cc(C)c3C(=O)Oc2c1C | ||
Standard InChI: InChI=1S/C18H14O8/c1-7-4-11(20)10(6-19)15-13(7)18(23)26-14-8(2)12(24-3)5-9(17(21)22)16(14)25-15/h4-6,20H,1-3H3,(H,21,22) | ||
HET Code: PJA | PubChem: 23725 | |
DrugBank: - | ChEMBL: CHEMBL176570 | |
Molecular Formula: C18H14O8 | Mol. Weight: 358.06888 | logP: 2.85324 |
HBD: 2 | HBA: 7 | |
#Rotatable Bonds: 3 | TPSA: 119.36 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Imine Condensation | MET 1 | A | 155.65 | - | Aldehyde |
Binding Affinity |
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Database Name | Value |
PDBBind | IC50 : 1400 nM |