PDB Entry (3kou)
PDB ID: 3kou Resolution: 1.78 Å Exp. Method: X-RAY DIFFRACTION
PMID: 22529956 DOI: 10.1371/journal.pone.0034918
Protein
Protein Name: 2'-phospho-ADP-ribosyl cyclase
Uniprot ID/ACC: Q9TTF5 (Q9TTF5_BOVIN) Organism: Bos taurus (Bovine)
Gene Symbol: CD38 Gene ID: 327677
Protein Class: HYDROLASE
Ligand
Ligand Name:   nicotinamide 2'-deoxy-2'-fluororibofuranosyl adenine dinucleotide
Canonical SMILES:   NC(=O)c1ccc[n+](c1)[C@@H]1O[C@H](COP(O)(=O)OP(O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n2cnc3c(N)ncnc23)[C@@H](O)[C@H]1F
Standard InChI:   InChI=1S/C21H26FN7O13P2/c22-12-14(30)10(40-20(12)28-3-1-2-9(4-28)18(24)33)5-38-43(34,35)42-44(36,37)39-6-11-15(31)16(32)21(41-11)29-8-27-13-17(23)25-7-26-19(13)29/h1-4,7-8,10-12,14-16,20-21,30-32H,5-6H2,(H5-,23,24,25,26,33,34,35,36,37)/p+1/t10-,11-,12-,14-,15-,16-,20-,21-/m1/s1
HET Code:   2NF PubChem:   44238636
DrugBank:   - ChEMBL:   -
Molecular Formula:   C21H27FN7O13P2+ Mol. Weight:   666.11206 logP:   -2.0387
HBD:   7 HBA:   16
#Rotatable Bonds:   11 TPSA:   298.03
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Acyl Substitution GLU 218 B 13.01 10.72 Aminium Ion
Binding Affinity
-