PDB Entry (6yg7)
PDB ID: 6yg7 Resolution: 2.2 Å Exp. Method: X-RAY DIFFRACTION
PMID: 32783966 DOI: 10.1016/j.chembiol.2020.07.014
Protein
Protein Name: Dual specificity mitogen-activated protein kinase kinase 7
Uniprot ID/ACC: O14733 (MP2K7_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: MAP2K7 Gene ID: 5609
Protein Class: TRANSFERASE
Ligand
Ligand Name:   SB1-G-23
Canonical SMILES:   CCN1CCN(Cc2ccc(NC(=O)c3ccc(C)c(Oc4ccnc(N[C@@H]5CCN(C5)C(=O)C=C)n4)c3)cc2C(F)(F)F)CC1
Standard InChI:   InChI=1S/C33H38F3N7O3/c1-4-30(44)43-13-11-26(21-43)39-32-37-12-10-29(40-32)46-28-18-23(7-6-22(28)3)31(45)38-25-9-8-24(27(19-25)33(34,35)36)20-42-16-14-41(5-2)15-17-42/h4,6-10,12,18-19,26H,1,5,11,13-17,20-21H2,2-3H3,(H,38,45)(H,37,39,40)/t26-/m1/s1
HET Code:   OQ2 PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C33H38F3N7O3 Mol. Weight:   637.2988 logP:   5.18472
HBD:   2 HBA:   8
#Rotatable Bonds:   10 TPSA:   102.93
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 218 B 7.98 11.82 Vinyl Carbonyl
Binding Affinity
-