PDB Entry (6yeo) |
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PDB ID: 6yeo | Resolution: 2.04 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 32545682 | DOI: 10.3390/biom10060899 | |
Protein |
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Protein Name: Beta-lactamase | |
Uniprot ID/ACC: P00811 (AMPC_ECOLI) | Organism: Escherichia coli (strain K12) |
Gene Symbol: ampC | Gene ID: 948669 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: CB2 | ||
Canonical SMILES: NCc1ccc(cc1)C(=O)N[C@H]1Cc2cccc(C(O)=O)c2OB1O | ||
Standard InChI: InChI=1S/C17H17BN2O5/c19-9-10-4-6-11(7-5-10)16(21)20-14-8-12-2-1-3-13(17(22)23)15(12)25-18(14)24/h1-7,14,24H,8-9,19H2,(H,20,21)(H,22,23)/t14-/m0/s1 | ||
HET Code: OK3 | PubChem: 142473761 | |
DrugBank: - | ChEMBL: CHEMBL4533632 | |
Molecular Formula: C17H17BN2O5 | Mol. Weight: 340.12305 | logP: 0.5967 |
HBD: 4 | HBA: 5 | |
#Rotatable Bonds: 4 | TPSA: 121.88 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Borylation | SER 64 | A | 13.85 | - | Boronic Acid |
Binding Affinity |
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