PDB Entry (5iyt) |
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PDB ID: 5iyt | Resolution: 1.73 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 27677239 | DOI: 10.1038/ncomms12761 | |
Protein |
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Protein Name: Genome polyprotein | |
Uniprot ID/ACC: O91734 (POLG_EC01F) | Organism: Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1) |
Gene Symbol: - | Gene ID: - |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: N-Ethyl 4-((1-cycloheptyl-1,2-dihydropyrazol-3-one-5-yl)-amino)-4-oxo-2Z-butenamide | ||
Canonical SMILES: CCNC(=O)/C=C\C(=O)Nc1cc(O)nn1C2CCCCCC2 | ||
Standard InChI: InChI=1S/C16H24N4O3/c1-2-17-14(21)9-10-15(22)18-13-11-16(23)19-20(13)12-7-5-3-4-6-8-12/h9-12H,2-8H2,1H3,(H,17,21)(H,18,22)(H,19,23)/b10-9- | ||
HET Code: NZN | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C16H24N4O3 | Mol. Weight: 320.18484 | logP: 2.1148 |
HBD: 3 | HBA: 5 | |
#Rotatable Bonds: 5 | TPSA: 96.25 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Michael Addition | CYS 147 | B | 28.12 | 13.91 | Vinyl Carbonyl |
Binding Affinity |
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