PDB Entry (3ct4) |
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PDB ID: 3ct4 | Resolution: 2.5 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 18957416 | DOI: 10.1074/jbc.M804893200 | |
Protein |
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Protein Name: PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK | |
Uniprot ID/ACC: Q9CIV8 (DHAK_LACLA) | Organism: Lactococcus lactis subsp. lactis (strain IL1403) (Streptococcus lactis) |
Gene Symbol: dhaK | Gene ID: - |
Protein Class: TRANSFERASE |
Ligand |
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Ligand Name: Dihydroxyacetone | ||
Canonical SMILES: OCC(=O)CO | ||
Standard InChI: InChI=1S/C3H6O3/c4-1-3(6)2-5/h4-5H,1-2H2 | ||
HET Code: 2HA | PubChem: 670 | |
DrugBank: DB01775 | ChEMBL: CHEMBL1229937 | |
Molecular Formula: C3H6O3 | Mol. Weight: 90.03169 | logP: -1.4599 |
HBD: 2 | HBA: 3 | |
#Rotatable Bonds: 2 | TPSA: 57.53 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Hemiaminalization | HIS 220 | A | 38.73 | 5.61 | Ketone |
Binding Affinity |
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- |