PDB Entry (1p01) |
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PDB ID: 1p01 | Resolution: 2.0 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 3122831 | DOI: 10.1021/bi00398a012 | |
Protein |
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Protein Name: Alpha-lytic protease | |
Uniprot ID/ACC: P00778 (PRLA_LYSEN) | Organism: Lysobacter enzymogenes |
Gene Symbol: alphaLP | Gene ID: - |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: N-(tert-butoxycarbonyl)-L-alanyl-N-[(1R)-1-(dihydroxyboranyl)-2-methylpropyl]-L-prolinamide | ||
Canonical SMILES: CC(C)[C@@H](B(O)O)N(C(=O)[C@H](C)NC(=O)OC(C)(C)C)C(=O)[C@@H]1CCCN1 | ||
Standard InChI: InChI=1S/C17H32BN3O6/c1-10(2)13(18(25)26)21(15(23)12-8-7-9-19-12)14(22)11(3)20-16(24)27-17(4,5)6/h10-13,19,25-26H,7-9H2,1-6H3,(H,20,24)/t11-,12-,13-/m0/s1 | ||
HET Code: 0EG | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C17H32BN3O6 | Mol. Weight: 385.2384 | logP: 0.0434 |
HBD: 4 | HBA: 7 | |
#Rotatable Bonds: 6 | TPSA: 128.2 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Borylation | SER 195 | A | 19.07 | - | Boronic Acid |
Binding Affinity |
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Database Name | Value |
PDBBind | Ki : 0.35 nM |