PDB Entry (1p01)
PDB ID: 1p01 Resolution: 2.0 Å Exp. Method: X-RAY DIFFRACTION
PMID: 3122831 DOI: 10.1021/bi00398a012
Protein
Protein Name: Alpha-lytic protease
Uniprot ID/ACC: P00778 (PRLA_LYSEN) Organism: Lysobacter enzymogenes
Gene Symbol: alphaLP Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   N-(tert-butoxycarbonyl)-L-alanyl-N-[(1R)-1-(dihydroxyboranyl)-2-methylpropyl]-L-prolinamide
Canonical SMILES:   CC(C)[C@@H](B(O)O)N(C(=O)[C@H](C)NC(=O)OC(C)(C)C)C(=O)[C@@H]1CCCN1
Standard InChI:   InChI=1S/C17H32BN3O6/c1-10(2)13(18(25)26)21(15(23)12-8-7-9-19-12)14(22)11(3)20-16(24)27-17(4,5)6/h10-13,19,25-26H,7-9H2,1-6H3,(H,20,24)/t11-,12-,13-/m0/s1
HET Code:   0EG PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C17H32BN3O6 Mol. Weight:   385.2384 logP:   0.0434
HBD:   4 HBA:   7
#Rotatable Bonds:   6 TPSA:   128.2
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Borylation SER 195 A 19.07 - Boronic Acid
Binding Affinity
Database Name Value
PDBBind Ki : 0.35 nM