PDB Entry (5h8i)
PDB ID: 5h8i Resolution: 1.97 Å Exp. Method: X-RAY DIFFRACTION
PMID: 27066023 DOI: 10.3389/fpls.2016.00350
Protein
Protein Name: N-carbamoylputrescine amidohydrolase, putative
Uniprot ID/ACC: G7ITU5 (G7ITU5_MEDTR) Organism: Medicago truncatula (Barrel medic) (Medicago tribuloides)
Gene Symbol: 11406591 Gene ID: 11406591
Protein Class: HYDROLASE
Ligand
Ligand Name:   N-carbamoylputrescine
Canonical SMILES:   NCCCCNC(O)=O
Standard InChI:   InChI=1S/C5H12N2O2/c6-3-1-2-4-7-5(8)9/h7H,1-4,6H2,(H,8,9)
HET Code:   N2H PubChem:   18964294
DrugBank:   - ChEMBL:   -
Molecular Formula:   C5H12N2O2 Mol. Weight:   132.08987 logP:   -0.0071
HBD:   3 HBA:   2
#Rotatable Bonds:   4 TPSA:   75.35
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Acyl Substitution CYS 158 J 9.06 14.94 Carbamate
Binding Affinity
-