PDB Entry (5h8i) |
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PDB ID: 5h8i | Resolution: 1.97 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 27066023 | DOI: 10.3389/fpls.2016.00350 | |
Protein |
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Protein Name: N-carbamoylputrescine amidohydrolase, putative | |
Uniprot ID/ACC: G7ITU5 (G7ITU5_MEDTR) | Organism: Medicago truncatula (Barrel medic) (Medicago tribuloides) |
Gene Symbol: 11406591 | Gene ID: 11406591 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: N-carbamoylputrescine | ||
Canonical SMILES: NCCCCNC(O)=O | ||
Standard InChI: InChI=1S/C5H12N2O2/c6-3-1-2-4-7-5(8)9/h7H,1-4,6H2,(H,8,9) | ||
HET Code: N2H | PubChem: 18964294 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C5H12N2O2 | Mol. Weight: 132.08987 | logP: -0.0071 |
HBD: 3 | HBA: 2 | |
#Rotatable Bonds: 4 | TPSA: 75.35 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Acyl Substitution | CYS 158 | J | 9.06 | 14.94 | Carbamate |
Binding Affinity |
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