PDB Entry (4onm) |
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PDB ID: 4onm | Resolution: 1.35 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 25909880 | DOI: 10.1021/acschembio.5b00222 | |
Protein |
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Protein Name: Ubiquitin-conjugating enzyme E2 N | |
Uniprot ID/ACC: P61088 (UBE2N_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: UBE2N | Gene ID: 7334 |
Protein Class: LIGASE |
Ligand |
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Ligand Name: NSC697923 | ||
Canonical SMILES: Cc1ccc(cc1)S(=O)(=O)c2ccc(o2)[N+](=O)[O-] | ||
Standard InChI: InChI=1S/C11H9NO5S/c1-8-2-4-9(5-3-8)18(15,16)11-7-6-10(17-11)12(13)14/h2-7H,1H3 | ||
HET Code: N2F | PubChem: 394449 | |
DrugBank: - | ChEMBL: CHEMBL1698008 | |
Molecular Formula: C11H9NO5S | Mol. Weight: 267.02014 | logP: 2.32902 |
HBD: 0 | HBA: 5 | |
#Rotatable Bonds: 3 | TPSA: 90.42 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Aromatic Substitution | CYS 87 | B | 87.17 | 10.72 | Aryl Sulfone |
Binding Affinity |
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