PDB Entry (4mz4) |
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PDB ID: 4mz4 | Resolution: 1.63 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 24252545 | DOI: 10.1016/j.bmcl.2013.10.060 | |
Protein |
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Protein Name: Genome polyprotein | |
Uniprot ID/ACC: O92972 (POLG_HCVJ4) | Organism: Hepatitis C virus genotype 1b (strain HC-J4) (HCV) |
Gene Symbol: - | Gene ID: - |
Protein Class: TRANSFERASE |
Ligand |
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Ligand Name: 1-[(2-chloroquinolin-3-yl)methyl]-6-fluoro-5-methyl-3-(2-oxo-1,2-dihydropyridin-3-yl)-1H-indole-2-carboxylic acid | ||
Canonical SMILES: Cc1cc2c(c(C(O)=O)n(Cc3cc4ccccc4nc3Cl)c2cc1F)-c1ccc[nH]c1=O | ||
Standard InChI: InChI=1S/C25H17ClFN3O3/c1-13-9-17-20(11-18(13)27)30(12-15-10-14-5-2-3-7-19(14)29-23(15)26)22(25(32)33)21(17)16-6-4-8-28-24(16)31/h2-11H,12H2,1H3,(H,28,31)(H,32,33) | ||
HET Code: 2F3 | PubChem: 25226377 | |
DrugBank: - | ChEMBL: CHEMBL3092124 | |
Molecular Formula: C25H17ClFN3O3 | Mol. Weight: 461.09424 | logP: 5.39222 |
HBD: 2 | HBA: 4 | |
#Rotatable Bonds: 4 | TPSA: 87.98 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Aromatic Substitution | CYS 366 | A | 48.61 | 15.51 | Aryl Halide |
Binding Affinity |
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Database Name | Value |
PDBBind | IC50 : 13 nM |