PDB Entry (3vkk)
PDB ID: 3vkk Resolution: 2.0 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Cytosolic beta-glucosidase
Uniprot ID/ACC: Q9H227 (GBA3_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: GBA3 Gene ID: 57733
Protein Class: HYDROLASE
Ligand
Ligand Name:   alpha-D-Mannose
Canonical SMILES:   OC[C@@H]1[C@@H](O)[C@H](O)[C@H](O)[C@H](O1)O
Standard InChI:   InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5+,6+/m1/s1
HET Code:   MAN PubChem:   185698
DrugBank:   - ChEMBL:   CHEMBL365590
Molecular Formula:   C6H12O6 Mol. Weight:   180.06339 logP:   -3.2214
HBD:   5 HBA:   6
#Rotatable Bonds:   1 TPSA:   110.38
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Acyl Substitution GLU 373 A 12.73 5.73 Hemiacetal
Binding Affinity
-