PDB Entry (3pdf) |
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PDB ID: 3pdf | Resolution: 1.85 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: - | |
Protein |
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Protein Name: Dipeptidyl peptidase 1 | |
Uniprot ID/ACC: P53634 (CATC_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: CTSC | Gene ID: 1075 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: 2,5-dibromo-N-[(3R,5S)-1-cyano-5-methylpyrrolidin-3-yl]benzene-1-sulfonamide | ||
Canonical SMILES: N#CN1C[C@@H](C[C@@H]1C)NS(=O)(=O)c2cc(Br)ccc2Br | ||
Standard InChI: InChI=1S/C12H13Br2N3O2S/c1-8-4-10(6-17(8)7-15)16-20(18,19)12-5-9(13)2-3-11(12)14/h2-3,5,8,10,16H,4,6H2,1H3/t8-,10+/m0/s1 | ||
HET Code: LXV | PubChem: 25174148 | |
DrugBank: - | ChEMBL: CHEMBL1672434 | |
Molecular Formula: C12H13Br2N3O2S | Mol. Weight: 420.90952 | logP: 2.43378 |
HBD: 1 | HBA: 4 | |
#Rotatable Bonds: 3 | TPSA: 73.2 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Addition to a Triple Bond | CYS 234 | A | 20.32 | 11.64 | Cyanamide |
Binding Affinity |
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