PDB Entry (3f9d)
PDB ID: 3f9d Resolution: 2.0 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Cellular retinoic acid-binding protein 2
Uniprot ID/ACC: P29373 (RABP2_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: CRABP2 Gene ID: 1382
Protein Class: TRANSPORTER
Ligand
Ligand Name:   Beta‐ionylideneacetaldehyde
Canonical SMILES:   O=C/C=C(\C)/C=C/C(C1(C)C)=C(C)CCC1
Standard InChI:   InChI=1S/C15H22O/c1-12(9-11-16)7-8-14-13(2)6-5-10-15(14,3)4/h7-9,11H,5-6,10H2,1-4H3/b8-7+,12-9+
HET Code:   LSR PubChem:   5355026
DrugBank:   - ChEMBL:   -
Molecular Formula:   C15H22O Mol. Weight:   218.16707 logP:   4.2144
HBD:   0 HBA:   1
#Rotatable Bonds:   3 TPSA:   17.07
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Imine Condensation LYS 132 A 18.27 7.71 Aldehyde
Binding Affinity
-