PDB Entry (6spj) |
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PDB ID: 6spj | Resolution: 1.97 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 32139772 | DOI: 10.1038/s42003-020-0826-3 | |
Protein |
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Protein Name: Superoxide dismutase [Cu-Zn] | |
Uniprot ID/ACC: P00441 (SODC_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: SOD1 | Gene ID: 6647 |
Protein Class: OXIDOREDUCTASE |
Ligand |
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Ligand Name: N-(pyridin‐2‐yl)isoselenazolinone | ||
Canonical SMILES: c1cccc(c12)[se]n(c2=O)-c3ccccn3 | ||
Standard InChI: InChI=1S/C12H8N2OSe/c15-12-9-5-1-2-6-10(9)16-14(12)11-7-3-4-8-13-11/h1-8H | ||
HET Code: LR2 | PubChem: 368650 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C12H8N2OSe | Mol. Weight: 275.9802 | logP: 1.4427 |
HBD: 0 | HBA: 3 | |
#Rotatable Bonds: 1 | TPSA: 34.89 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Ring Opening | CYS 111 | I | 24.96 | 12.03 | Isoselenazolinone |
Binding Affinity |
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