PDB Entry (6spj)
PDB ID: 6spj Resolution: 1.97 Å Exp. Method: X-RAY DIFFRACTION
PMID: 32139772 DOI: 10.1038/s42003-020-0826-3
Protein
Protein Name: Superoxide dismutase [Cu-Zn]
Uniprot ID/ACC: P00441 (SODC_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: SOD1 Gene ID: 6647
Protein Class: OXIDOREDUCTASE
Ligand
Ligand Name:   N-(pyridin‐2‐yl)isoselenazolinone
Canonical SMILES:   c1cccc(c12)[se]n(c2=O)-c3ccccn3
Standard InChI:   InChI=1S/C12H8N2OSe/c15-12-9-5-1-2-6-10(9)16-14(12)11-7-3-4-8-13-11/h1-8H
HET Code:   LR2 PubChem:   368650
DrugBank:   - ChEMBL:   -
Molecular Formula:   C12H8N2OSe Mol. Weight:   275.9802 logP:   1.4427
HBD:   0 HBA:   3
#Rotatable Bonds:   1 TPSA:   34.89
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Ring Opening CYS 111 I 24.96 12.03 Isoselenazolinone
Binding Affinity
-