PDB Entry (2iph)
PDB ID: 2iph Resolution: 1.75 Å Exp. Method: X-RAY DIFFRACTION
PMID: 21128685 DOI: 10.1021/bi1008497
Protein
Protein Name: Genome polyprotein
Uniprot ID/ACC: Q04544 (POLG_SOUV3) Organism: Southampton virus (strain GI/Human/United Kingdom/Southampton/1991) (SHV) (Hu/NV/SHV/1991/UK)
Gene Symbol: ORF1 Gene ID: -
Protein Class: HYDROLASE
Ligand
Ligand Name:   acetyl-Glu-Phe-Gln-Leu-Gln-X
Canonical SMILES:   CCOC(=O)/C=C/[C@H](CCC(=O)N)NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CCC(=O)N)NC(=O)[C@@H](NC(=O)[C@H](CCC([O-])=O)NC(=O)C)Cc1ccccc1
Standard InChI:   InChI=1S/C36H53N7O11/c1-5-54-32(49)18-12-24(11-15-29(37)45)40-35(52)27(19-21(2)3)42-34(51)26(13-16-30(38)46)41-36(53)28(20-23-9-7-6-8-10-23)43-33(50)25(39-22(4)44)14-17-31(47)48/h6-10,12,18,21,24-28H,5,11,13-17,19-20H2,1-4H3,(H2,37,45)(H2,38,46)(H,39,44)(H,40,52)(H,41,53)(H,42,51)(H,43,50)(H,47,48)/p-1/b18-12+/t24-,25-,26-,27-,28-/m0/s1
HET Code:   LGG PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C36H52N7O11- Mol. Weight:   758.37305 logP:   -2.1005
HBD:   7 HBA:   11
#Rotatable Bonds:   25 TPSA:   298.11
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 1139 A 23.13 15.24 Vinyl Carbonyl
Binding Affinity
-