PDB Entry (3dpm)
PDB ID: 3dpm Resolution: 2.35 Å Exp. Method: X-RAY DIFFRACTION
PMID: 19064254 DOI: 10.1016/j.chom.2008.10.005
Protein
Protein Name: Protein CT_858
Uniprot ID/ACC: O84866 (Y858_CHLTR) Organism: Chlamydia trachomatis (strain D/UW-3/Cx)
Gene Symbol: CT_858 Gene ID: 884659
Protein Class: TRANSFERASE
Ligand
Ligand Name:   lactacystin
Canonical SMILES:   CC(C)[C@H](O)[C@]1(NC(=O)[C@H](C)[C@@H]1O)C(=O)SC[C@H](NC(C)=O)C(O)=O
Standard InChI:   InChI=1S/C15H24N2O7S/c1-6(2)10(19)15(11(20)7(3)12(21)17-15)14(24)25-5-9(13(22)23)16-8(4)18/h6-7,9-11,19-20H,5H2,1-4H3,(H,16,18)(H,17,21)(H,22,23)/t7-,9+,10+,11+,15-/m1/s1
HET Code:   LAS PubChem:   6610292
DrugBank:   - ChEMBL:   CHEMBL374308
Molecular Formula:   C15H24N2O7S Mol. Weight:   376.13043 logP:   -1.282
HBD:   5 HBA:   7
#Rotatable Bonds:   7 TPSA:   153.03
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Acyl Substitution SER 499 A 22.09 - Thioster
Binding Affinity
-