PDB Entry (6nzg) |
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PDB ID: 6nzg | Resolution: 2.43 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 31774274 | DOI: 10.1021/acschembio.9b00788 | |
Protein |
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Protein Name: DUF4982 domain-containing protein | |
Uniprot ID/ACC: A0A414F142 (A0A414F142_BACUN) | Organism: Bacteroides uniformis |
Gene Symbol: DW795_10005 | Gene ID: - |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: cyclophellitol-6-carboxylate aziridine | ||
Canonical SMILES: O[C@H]1[C@@H]2N[C@@H]2[C@@H]([C@@H](O)[C@@H]1O)C(O)=O | ||
Standard InChI: InChI=1S/C7H11NO5/c9-4-1(7(12)13)2-3(8-2)5(10)6(4)11/h1-6,8-11H,(H,12,13)/t1-,2+,3+,4+,5-,6-/m0/s1 | ||
HET Code: L9D | PubChem: 126961867 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C7H11NO5 | Mol. Weight: 189.06372 | logP: -2.8761 |
HBD: 5 | HBA: 5 | |
#Rotatable Bonds: 1 | TPSA: 119.93 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Aziridine Opening | GLU 526 | A | 13.37 | 9.7 | Aziridine |
Binding Affinity |
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