PDB Entry (6sc8)
PDB ID: 6sc8 Resolution: 2.11 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31813847 DOI: 10.1016/j.chembiol.2019.11.007
Protein
Protein Name: E3 ubiquitin-protein ligase RNF31
Uniprot ID/ACC: Q96EP0 (RNF31_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: RNF31 Gene ID: 55072
Protein Class: LIGASE
Ligand
Ligand Name:   [2-(methylamino)-2-oxidanylidene-ethyl] (~{E})-4-[(2-oxidanylidene-5,6,7,8-tetrahydro-1~{H}-quinolin-3-yl)carbonylamino]but-2-enoate
Canonical SMILES:   CNC(=O)COC(=O)/C=C/CNC(=O)c(c(=O)[nH]1)cc(c12)CCCC2
Standard InChI:   InChI=1S/C17H21N3O5/c1-18-14(21)10-25-15(22)7-4-8-19-16(23)12-9-11-5-2-3-6-13(11)20-17(12)24/h4,7,9H,2-3,5-6,8,10H2,1H3,(H,18,21)(H,19,23)(H,20,24)/b7-4+
HET Code:   L6E PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C17H21N3O5 Mol. Weight:   347.14813 logP:   -0.1711
HBD:   3 HBA:   5
#Rotatable Bonds:   6 TPSA:   117.36
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 885 A 89.3 - Vinyl Carbonyl
Binding Affinity
-