PDB Entry (6sc8) |
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PDB ID: 6sc8 | Resolution: 2.11 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 31813847 | DOI: 10.1016/j.chembiol.2019.11.007 | |
Protein |
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Protein Name: E3 ubiquitin-protein ligase RNF31 | |
Uniprot ID/ACC: Q96EP0 (RNF31_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: RNF31 | Gene ID: 55072 |
Protein Class: LIGASE |
Ligand |
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Ligand Name: [2-(methylamino)-2-oxidanylidene-ethyl] (~{E})-4-[(2-oxidanylidene-5,6,7,8-tetrahydro-1~{H}-quinolin-3-yl)carbonylamino]but-2-enoate | ||
Canonical SMILES: CNC(=O)COC(=O)/C=C/CNC(=O)c(c(=O)[nH]1)cc(c12)CCCC2 | ||
Standard InChI: InChI=1S/C17H21N3O5/c1-18-14(21)10-25-15(22)7-4-8-19-16(23)12-9-11-5-2-3-6-13(11)20-17(12)24/h4,7,9H,2-3,5-6,8,10H2,1H3,(H,18,21)(H,19,23)(H,20,24)/b7-4+ | ||
HET Code: L6E | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C17H21N3O5 | Mol. Weight: 347.14813 | logP: -0.1711 |
HBD: 3 | HBA: 5 | |
#Rotatable Bonds: 6 | TPSA: 117.36 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Michael Addition | CYS 885 | A | 89.3 | - | Vinyl Carbonyl |
Binding Affinity |
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