PDB Entry (3zmi)
PDB ID: 3zmi Resolution: 2.2 Å Exp. Method: X-RAY DIFFRACTION
PMID: 23665170 DOI: 10.1016/J.STR.2013.03.013
Protein
Protein Name: Rhomboid protease GlpG
Uniprot ID/ACC: P09391 (GLPG_ECOLI) Organism: Escherichia coli (strain K12)
Gene Symbol: glpG Gene ID: 58460244
Protein Class: HYDROLASE
Ligand
Ligand Name:   monobactam L29
Canonical SMILES:   c1ccccc1OC(=O)N2[C@H](CC2=O)c3ccccc3
Standard InChI:   InChI=1S/C16H13NO3/c18-15-11-14(12-7-3-1-4-8-12)17(15)16(19)20-13-9-5-2-6-10-13/h1-10,14H,11H2/t14-/m1/s1
HET Code:   L6C PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C16H13NO3 Mol. Weight:   267.08954 logP:   3.159
HBD:   0 HBA:   3
#Rotatable Bonds:   2 TPSA:   46.61
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Beta-Lactam Addition SER 201 A 26.63 - Beta-Lactam
Binding Affinity
Database Name Value
PDBBind IC50 : 1117 nM