PDB Entry (6sc5)
PDB ID: 6sc5 Resolution: 2.1 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31813847 DOI: 10.1016/j.chembiol.2019.11.007
Protein
Protein Name: E3 ubiquitin-protein ligase RNF31
Uniprot ID/ACC: Q96EP0 (RNF31_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: RNF31 Gene ID: 55072
Protein Class: LIGASE
Ligand
Ligand Name:   methyl (2E)-4-[(2-oxo-1,2,5,6,7,8-hexahydroquinolin-3-yl)formamido]but-2-enoate
Canonical SMILES:   COC(=O)/C=C/CNC(=O)c(c(=O)[nH]1)cc(c12)CCCC2
Standard InChI:   InChI=1S/C15H18N2O4/c1-21-13(18)7-4-8-16-14(19)11-9-10-5-2-3-6-12(10)17-15(11)20/h4,7,9H,2-3,5-6,8H2,1H3,(H,16,19)(H,17,20)/b7-4+
HET Code:   L6B PubChem:   129179200
DrugBank:   - ChEMBL:   -
Molecular Formula:   C15H18N2O4 Mol. Weight:   290.12665 logP:   0.7127
HBD:   2 HBA:   4
#Rotatable Bonds:   4 TPSA:   88.26
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 885 A 90.86 10.51 Vinyl Carbonyl
Binding Affinity
-