PDB Entry (6sc9)
PDB ID: 6sc9 Resolution: 2.47 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31813847 DOI: 10.1016/j.chembiol.2019.11.007
Protein
Protein Name: E3 ubiquitin-protein ligase RNF31
Uniprot ID/ACC: Q96EP0 (RNF31_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: RNF31 Gene ID: 55072
Protein Class: LIGASE
Ligand
Ligand Name:   HOIPIN8
Canonical SMILES:   Cn1cc(cn1)-c1ccc(C(O)=O)c(\C=C\C(=O)c2c(F)cc(cc2F)-c2cn[nH]c2)c1
Standard InChI:   InChI=1S/C23H16F2N4O3/c1-29-12-17(11-28-29)13-2-4-18(23(31)32)14(6-13)3-5-21(30)22-19(24)7-15(8-20(22)25)16-9-26-27-10-16/h2-12H,1H3,(H,26,27)(H,31,32)/b5-3+
HET Code:   L68 PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C23H16F2N4O3 Mol. Weight:   434.11905 logP:   4.3497
HBD:   2 HBA:   5
#Rotatable Bonds:   6 TPSA:   100.87
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Michael Addition CYS 885 A 84.67 11.12 Vinyl Carbonyl
Binding Affinity
-