PDB Entry (3zmh)
PDB ID: 3zmh Resolution: 2.3 Å Exp. Method: X-RAY DIFFRACTION
PMID: 23665170 DOI: 10.1016/j.str.2013.03.013
Protein
Protein Name: Rhomboid protease GlpG
Uniprot ID/ACC: P09391 (GLPG_ECOLI) Organism: Escherichia coli (strain K12)
Gene Symbol: glpG Gene ID: 58460244
Protein Class: HYDROLASE
Ligand
Ligand Name:   monobactam L62
Canonical SMILES:   C1CCCC1OC(=O)N2[C@H](CC2=O)c3ccccc3
Standard InChI:   InChI=1S/C15H17NO3/c17-14-10-13(11-6-2-1-3-7-11)16(14)15(18)19-12-8-4-5-9-12/h1-3,6-7,12-13H,4-5,8-10H2/t13-/m1/s1
HET Code:   L62 PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C15H17NO3 Mol. Weight:   259.12085 logP:   3.0392
HBD:   0 HBA:   3
#Rotatable Bonds:   2 TPSA:   46.61
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Beta-Lactam Addition SER 201 A 11.33 - Beta-Lactam
Binding Affinity
Database Name Value
PDBBind IC50 : 5267 nM