PDB Entry (6s1s)
PDB ID: 6s1s Resolution: 1.78 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31574990 DOI: 10.3390/antibiotics8040171
Protein
Protein Name: Beta-lactamase
Uniprot ID/ACC: Q541D8 (Q541D8_PSEAI) Organism: Pseudomonas aeruginosa
Gene Symbol: ampC Gene ID: 878149
Protein Class: HYDROLASE
Ligand
Ligand Name:   (~{E})-3-[3-(dihydroxyboranyl)phenyl]prop-2-enoic acid
Canonical SMILES:   OB(O)c1cccc(\C=C\C(O)=O)c1
Standard InChI:   InChI=1S/C9H9BO4/c11-9(12)5-4-7-2-1-3-8(6-7)10(13)14/h1-6,13-14H,(H,11,12)/b5-4+
HET Code:   KRT PubChem:   5844876
DrugBank:   - ChEMBL:   CHEMBL140747
Molecular Formula:   C9H9BO4 Mol. Weight:   192.05939 logP:   -0.5358
HBD:   3 HBA:   3
#Rotatable Bonds:   3 TPSA:   77.76
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Borylation SER 64 A 13.83 - Boronic Acid
Binding Affinity
-