PDB Entry (2v82)
PDB ID: 2v82 Resolution: 2.1 Å Exp. Method: X-RAY DIFFRACTION
PMID: 17981470 DOI: 10.1016/j.bmc.2007.10.043
Protein
Protein Name: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase
Uniprot ID/ACC: Q6BF16 (DGOA_ECOLI) Organism: Escherichia coli (strain K12)
Gene Symbol: dgoA Gene ID: 2847766
Protein Class: LYASE
Ligand
Ligand Name:   2-KETO-DEOXY-GALACTOSE
Canonical SMILES:   O[C@H](COP(O)(O)=O)[C@H](O)CC(=O)C(O)=O
Standard InChI:   InChI=1S/C6H11O9P/c7-3(1-4(8)6(10)11)5(9)2-15-16(12,13)14/h3,5,7,9H,1-2H2,(H,10,11)(H2,12,13,14)/t3-,5-/m1/s1
HET Code:   KDP PubChem:   5459949
DrugBank:   - ChEMBL:   CHEMBL1233835
Molecular Formula:   C6H11O9P Mol. Weight:   258.01407 logP:   -2.1387
HBD:   5 HBA:   6
#Rotatable Bonds:   7 TPSA:   161.59
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Imine Condensation LYS 126 A 8.67 7.92 Ketone
Binding Affinity
-