PDB Entry (5zhs)
PDB ID: 5zhs Resolution: 1.49 Å Exp. Method: X-RAY DIFFRACTION
PMID: 30391752 DOI: 10.1016/j.molp.2018.10.006
Protein
Protein Name: Strigolactone esterase D14
Uniprot ID/ACC: Q10QA5 (D14_ORYSJ) Organism: Oryza sativa subsp. japonica (Rice)
Gene Symbol: D14 Gene ID: 4331983
Protein Class: HYDROLASE
Ligand
Ligand Name:   KK052
Canonical SMILES:   c1ccccc1N2CCN(CC2)C(=O)n3ccnn3
Standard InChI:   InChI=1S/C13H15N5O/c19-13(18-7-6-14-15-18)17-10-8-16(9-11-17)12-4-2-1-3-5-12/h1-7H,8-11H2
HET Code:   KAT PubChem:   -
DrugBank:   - ChEMBL:   -
Molecular Formula:   C13H15N5O Mol. Weight:   257.12766 logP:   1.0684
HBD:   0 HBA:   5
#Rotatable Bonds:   1 TPSA:   54.26
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Acyl Substitution SER 147 A 9.98 - Hydrazide
Binding Affinity
-