PDB Entry (1h7p) |
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PDB ID: 1h7p | Resolution: 1.64 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 11545591 | DOI: 10.1006/JMBI.2001.4947 | |
Protein |
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Protein Name: Delta-aminolevulinic acid dehydratase | |
Uniprot ID/ACC: P05373 (HEM2_YEAST) | Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) |
Gene Symbol: HEM2 | Gene ID: 852842 |
Protein Class: LYASE |
Ligand |
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Ligand Name: 4-KETO-5-AMINO-HEXANOIC | ||
Canonical SMILES: C[C@@H](N)C(=O)CCC(O)=O | ||
Standard InChI: InChI=1S/C6H11NO3/c1-4(7)5(8)2-3-6(9)10/h4H,2-3,7H2,1H3,(H,9,10)/t4-/m1/s1 | ||
HET Code: KAH | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C6H11NO3 | Mol. Weight: 145.0739 | logP: -0.2325 |
HBD: 2 | HBA: 3 | |
#Rotatable Bonds: 4 | TPSA: 80.39 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Hemiaminalization | LYS 263 | A | 14.14 | 4.47 | Ketone |
Binding Affinity |
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