PDB Entry (3cog) |
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PDB ID: 3cog | Resolution: 2.0 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 19019829 | DOI: 10.1074/jbc.M805459200 | |
Protein |
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Protein Name: Cystathionine gamma-lyase | |
Uniprot ID/ACC: P32929 (CGL_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: CTH | Gene ID: 1491 |
Protein Class: LYASE |
Ligand |
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Ligand Name: DL-propargylglycine | ||
Canonical SMILES: N[C@H](CC#C)C(O)=O | ||
Standard InChI: InChI=1S/C5H7NO2/c1-2-3-4(6)5(7)8/h1,4H,3,6H2,(H,7,8)/t4-/m1/s1 | ||
HET Code: 2AG | PubChem: 6992713 | |
DrugBank: - | ChEMBL: CHEMBL51369 | |
Molecular Formula: C5H7NO2 | Mol. Weight: 113.047676 | logP: -0.5784 |
HBD: 2 | HBA: 2 | |
#Rotatable Bonds: 2 | TPSA: 63.32 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Addition to a Triple Bond | TYR 114 | A | 41.13 | 16.43 | Alkyne |
Binding Affinity |
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