PDB Entry (3cog)
PDB ID: 3cog Resolution: 2.0 Å Exp. Method: X-RAY DIFFRACTION
PMID: 19019829 DOI: 10.1074/jbc.M805459200
Protein
Protein Name: Cystathionine gamma-lyase
Uniprot ID/ACC: P32929 (CGL_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: CTH Gene ID: 1491
Protein Class: LYASE
Ligand
Ligand Name:   DL-propargylglycine
Canonical SMILES:   N[C@H](CC#C)C(O)=O
Standard InChI:   InChI=1S/C5H7NO2/c1-2-3-4(6)5(7)8/h1,4H,3,6H2,(H,7,8)/t4-/m1/s1
HET Code:   2AG PubChem:   6992713
DrugBank:   - ChEMBL:   CHEMBL51369
Molecular Formula:   C5H7NO2 Mol. Weight:   113.047676 logP:   -0.5784
HBD:   2 HBA:   2
#Rotatable Bonds:   2 TPSA:   63.32
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Addition to a Triple Bond TYR 114 A 41.13 16.43 Alkyne
Binding Affinity
-