PDB Entry (6n2j) |
||
| ||
PDB ID: 6n2j | Resolution: 1.8 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 30613331 | DOI: 10.1021/acsmedchemlett.8b00382 | |
Protein |
|
Protein Name: GTPase KRas | |
Uniprot ID/ACC: P01116 (RASK_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: KRAS | Gene ID: 3845 |
Protein Class: SIGNALING PROTEIN |
Ligand |
||
Ligand Name: 1-(4-(7-(naphthalen-1-yl)-5,6,7,8-tetrahydropyrido[3,4-d]pyrimidin-4-yl)piperazin-1-yl)prop-2-en-1-one | ||
Canonical SMILES: C=CC(=O)N1CCN(CC1)c1ncnc2CN(CCc12)c1cccc2ccccc12 | ||
Standard InChI: InChI=1S/C24H25N5O/c1-2-23(30)27-12-14-28(15-13-27)24-20-10-11-29(16-21(20)25-17-26-24)22-9-5-7-18-6-3-4-8-19(18)22/h2-9,17H,1,10-16H2 | ||
HET Code: K9M | PubChem: 132162816 | |
DrugBank: - | ChEMBL: CHEMBL4466927 | |
Molecular Formula: C24H25N5O | Mol. Weight: 399.2059 | logP: 3.0271 |
HBD: 0 | HBA: 5 | |
#Rotatable Bonds: 3 | TPSA: 52.57 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Michael Addition | CYS 12 | A | 102.49 | 10.17 | Vinyl Carbonyl |
Binding Affinity |
||
- |