PDB Entry (4y7y) |
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PDB ID: 4y7y | Resolution: 2.4 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 26020686 | DOI: 10.1021/jacs.5b03688 | |
Protein |
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Protein Name: Proteasome subunit beta type-2 | |
Uniprot ID/ACC: P25043 (PSB2_YEAST) | Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) |
Gene Symbol: PUP1 | Gene ID: 854328 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: Ac-LAA-ep | ||
Canonical SMILES: O=C(C)N[C@@H](CC(C)C)C(=O)N[C@@H](C)C(=O)N[C@@H](C)C(=O)[C@@]1(C)OC1 | ||
Standard InChI: InChI=1S/C17H29N3O5/c1-9(2)7-13(20-12(5)21)16(24)19-11(4)15(23)18-10(3)14(22)17(6)8-25-17/h9-11,13H,7-8H2,1-6H3,(H,18,23)(H,19,24)(H,20,21)/t10-,11-,13-,17-/m0/s1 | ||
HET Code: 2A1 | PubChem: - | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C17H29N3O5 | Mol. Weight: 355.21072 | logP: -0.0954 |
HBD: 3 | HBA: 5 | |
#Rotatable Bonds: 9 | TPSA: 116.9 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Cyclohemiaminoacetalization | THR 1 | A | 68.32 | - | Epoxide |
Binding Affinity |
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