PDB Entry (6eej)
PDB ID: 6eej Resolution: 1.89 Å Exp. Method: X-RAY DIFFRACTION
PMID: 31524380 DOI: 10.1021/acs.biochem.9b00652
Protein
Protein Name: Acetoacetate decarboxylase
Uniprot ID/ACC: D7C0E5 (D7C0E5_STRBB) Organism: Streptomyces bingchenggensis (strain BCW-1)
Gene Symbol: SBI_00515 Gene ID: -
Protein Class: LYASE
Ligand
Ligand Name:   (3E,5E)-6-(4-nitrophenyl)-2-oxohexa-3,5-dienoic acid
Canonical SMILES:   OC(=O)C(=O)\C=C\C=C\c1ccc(cc1)[N+]([O-])=O
Standard InChI:   InChI=1S/C12H9NO5/c14-11(12(15)16)4-2-1-3-9-5-7-10(8-6-9)13(17)18/h1-8H,(H,15,16)/b3-1+,4-2+
HET Code:   J6S PubChem:   138857406
DrugBank:   - ChEMBL:   -
Molecular Formula:   C12H9NO5 Mol. Weight:   247.04807 logP:   1.8179
HBD:   1 HBA:   4
#Rotatable Bonds:   5 TPSA:   97.51
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Imine Condensation LYS 122 A 5.38 6.93 Ketone
Binding Affinity
-