PDB Entry (5qiy) |
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PDB ID: 5qiy | Resolution: 1.58 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: - | |
Protein |
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Protein Name: Ubiquitin thioesterase OTUB2 | |
Uniprot ID/ACC: Q96DC9 (OTUB2_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: OTUB2 | Gene ID: 78990 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: PCM-0102954 | ||
Canonical SMILES: ClCC(=O)NNC(=O)c1ccccc1Cl | ||
Standard InChI: InChI=1S/C9H8Cl2N2O2/c10-5-8(14)12-13-9(15)6-3-1-2-4-7(6)11/h1-4H,5H2,(H,12,14)(H,13,15) | ||
HET Code: J61 | PubChem: 4848731 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C9H8Cl2N2O2 | Mol. Weight: 245.99628 | logP: 1.3398 |
HBD: 2 | HBA: 2 | |
#Rotatable Bonds: 2 | TPSA: 58.2 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Aliphatic Subsititution | CYS 51 | A | 6.06 | 12.31 | Halomethyl Carbonyl |
Binding Affinity |
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