PDB Entry (5qix) |
||
| ||
PDB ID: 5qix | Resolution: 1.39 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: - | |
Protein |
|
Protein Name: Ubiquitin thioesterase OTUB2 | |
Uniprot ID/ACC: Q96DC9 (OTUB2_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: OTUB2 | Gene ID: 78990 |
Protein Class: HYDROLASE |
Ligand |
||
Ligand Name: PCM-0103007 | ||
Canonical SMILES: ClCC(=O)NCC#Cc1ccccc1 | ||
Standard InChI: InChI=1S/C11H10ClNO/c12-9-11(14)13-8-4-7-10-5-2-1-3-6-10/h1-3,5-6H,8-9H2,(H,13,14) | ||
HET Code: J5V | PubChem: 52908093 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C11H10ClNO | Mol. Weight: 207.04509 | logP: 1.3931 |
HBD: 1 | HBA: 1 | |
#Rotatable Bonds: 2 | TPSA: 29.1 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Aliphatic Subsititution | CYS 51 | A | 10.2 | 12.63 | Halomethyl Carbonyl |
Binding Affinity |
||
- |