PDB Entry (5qix)
PDB ID: 5qix Resolution: 1.39 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Ubiquitin thioesterase OTUB2
Uniprot ID/ACC: Q96DC9 (OTUB2_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: OTUB2 Gene ID: 78990
Protein Class: HYDROLASE
Ligand
Ligand Name:   PCM-0103007
Canonical SMILES:   ClCC(=O)NCC#Cc1ccccc1
Standard InChI:   InChI=1S/C11H10ClNO/c12-9-11(14)13-8-4-7-10-5-2-1-3-6-10/h1-3,5-6H,8-9H2,(H,13,14)
HET Code:   J5V PubChem:   52908093
DrugBank:   - ChEMBL:   -
Molecular Formula:   C11H10ClNO Mol. Weight:   207.04509 logP:   1.3931
HBD:   1 HBA:   1
#Rotatable Bonds:   2 TPSA:   29.1
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Aliphatic Subsititution CYS 51 A 10.2 12.63 Halomethyl Carbonyl
Binding Affinity
-