PDB Entry (5qiv)
PDB ID: 5qiv Resolution: 1.39 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Ubiquitin thioesterase OTUB2
Uniprot ID/ACC: Q96DC9 (OTUB2_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: OTUB2 Gene ID: 78990
Protein Class: HYDROLASE
Ligand
Ligand Name:   PCM-0102998
Canonical SMILES:   ClCC(=O)NNC(=O)C[C@@H](CS1(=O)=O)CC1
Standard InChI:   InChI=1S/C8H13ClN2O4S/c9-4-8(13)11-10-7(12)3-6-1-2-16(14,15)5-6/h6H,1-5H2,(H,10,12)(H,11,13)/t6-/m0/s1
HET Code:   J5P PubChem:   40479775
DrugBank:   - ChEMBL:   -
Molecular Formula:   C8H13ClN2O4S Mol. Weight:   268.02844 logP:   -0.8026
HBD:   2 HBA:   4
#Rotatable Bonds:   3 TPSA:   92.34
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Aliphatic Subsititution CYS 51 A 5.98 12.46 Halomethyl Carbonyl
Binding Affinity
-