PDB Entry (5qiv) |
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PDB ID: 5qiv | Resolution: 1.39 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: - | |
Protein |
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Protein Name: Ubiquitin thioesterase OTUB2 | |
Uniprot ID/ACC: Q96DC9 (OTUB2_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: OTUB2 | Gene ID: 78990 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: PCM-0102998 | ||
Canonical SMILES: ClCC(=O)NNC(=O)C[C@@H](CS1(=O)=O)CC1 | ||
Standard InChI: InChI=1S/C8H13ClN2O4S/c9-4-8(13)11-10-7(12)3-6-1-2-16(14,15)5-6/h6H,1-5H2,(H,10,12)(H,11,13)/t6-/m0/s1 | ||
HET Code: J5P | PubChem: 40479775 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C8H13ClN2O4S | Mol. Weight: 268.02844 | logP: -0.8026 |
HBD: 2 | HBA: 4 | |
#Rotatable Bonds: 3 | TPSA: 92.34 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Aliphatic Subsititution | CYS 51 | A | 5.98 | 12.46 | Halomethyl Carbonyl |
Binding Affinity |
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