PDB Entry (5qiu)
PDB ID: 5qiu Resolution: 1.56 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Ubiquitin thioesterase OTUB2
Uniprot ID/ACC: Q96DC9 (OTUB2_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: OTUB2 Gene ID: 78990
Protein Class: HYDROLASE
Ligand
Ligand Name:   PCM-0103011
Canonical SMILES:   FC(F)(F)c1cccc(c1)C#CCNC(=O)CCl
Standard InChI:   InChI=1S/C12H9ClF3NO/c13-8-11(18)17-6-2-4-9-3-1-5-10(7-9)12(14,15)16/h1,3,5,7H,6,8H2,(H,17,18)
HET Code:   J5M PubChem:   54592437
DrugBank:   - ChEMBL:   -
Molecular Formula:   C12H9ClF3NO Mol. Weight:   275.03247 logP:   2.4119
HBD:   1 HBA:   1
#Rotatable Bonds:   2 TPSA:   29.1
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Aliphatic Subsititution CYS 51 A 9.39 12.23 Halomethyl Carbonyl
Binding Affinity
-