PDB Entry (5qir) |
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PDB ID: 5qir | Resolution: 1.43 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: - | |
Protein |
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Protein Name: Ubiquitin thioesterase OTUB2 | |
Uniprot ID/ACC: Q96DC9 (OTUB2_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: OTUB2 | Gene ID: 78990 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: PCM-0102305 | ||
Canonical SMILES: Fc1ccc(cc1C)CNC(=O)CCl | ||
Standard InChI: InChI=1S/C10H11ClFNO/c1-7-4-8(2-3-9(7)12)6-13-10(14)5-11/h2-4H,5-6H2,1H3,(H,13,14) | ||
HET Code: J5D | PubChem: 25323827 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C10H11ClFNO | Mol. Weight: 215.05132 | logP: 1.98912 |
HBD: 1 | HBA: 1 | |
#Rotatable Bonds: 3 | TPSA: 29.1 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Aliphatic Subsititution | CYS 51 | A | 9.69 | 11.96 | Halomethyl Carbonyl |
Binding Affinity |
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