PDB Entry (5qio) |
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PDB ID: 5qio | Resolution: 1.46 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: - | DOI: - | |
Protein |
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Protein Name: Ubiquitin thioesterase OTUB2 | |
Uniprot ID/ACC: Q96DC9 (OTUB2_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: OTUB2 | Gene ID: 78990 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: (1S,2S)-N'-(chloroacetyl)-2-phenylcyclopropane-1-carbohydrazide | ||
Canonical SMILES: c1ccccc1[C@H]2C[C@@H]2C(=O)NNC(=O)CCl | ||
Standard InChI: InChI=1S/C12H13ClN2O2/c13-7-11(16)14-15-12(17)10-6-9(10)8-4-2-1-3-5-8/h1-5,9-10H,6-7H2,(H,14,16)(H,15,17)/t9-,10+/m1/s1 | ||
HET Code: J4Y | PubChem: 689550 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C12H13ClN2O2 | Mol. Weight: 252.06656 | logP: 1.1763 |
HBD: 2 | HBA: 2 | |
#Rotatable Bonds: 3 | TPSA: 58.2 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Aliphatic Subsititution | CYS 51 | A | 6.01 | 12.88 | Halomethyl Carbonyl |
Binding Affinity |
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