PDB Entry (5qio)
PDB ID: 5qio Resolution: 1.46 Å Exp. Method: X-RAY DIFFRACTION
PMID: - DOI: -
Protein
Protein Name: Ubiquitin thioesterase OTUB2
Uniprot ID/ACC: Q96DC9 (OTUB2_HUMAN) Organism: Homo sapiens (Human)
Gene Symbol: OTUB2 Gene ID: 78990
Protein Class: HYDROLASE
Ligand
Ligand Name:   (1S,2S)-N'-(chloroacetyl)-2-phenylcyclopropane-1-carbohydrazide
Canonical SMILES:   c1ccccc1[C@H]2C[C@@H]2C(=O)NNC(=O)CCl
Standard InChI:   InChI=1S/C12H13ClN2O2/c13-7-11(16)14-15-12(17)10-6-9(10)8-4-2-1-3-5-8/h1-5,9-10H,6-7H2,(H,14,16)(H,15,17)/t9-,10+/m1/s1
HET Code:   J4Y PubChem:   689550
DrugBank:   - ChEMBL:   -
Molecular Formula:   C12H13ClN2O2 Mol. Weight:   252.06656 logP:   1.1763
HBD:   2 HBA:   2
#Rotatable Bonds:   3 TPSA:   58.2
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Aliphatic Subsititution CYS 51 A 6.01 12.88 Halomethyl Carbonyl
Binding Affinity
-