PDB Entry (1qa7)
PDB ID: 1qa7 Resolution: 1.9 Å Exp. Method: X-RAY DIFFRACTION
PMID: 10603326 DOI: 10.1006/viro.1999.9968
Protein
Protein Name: Genome polyprotein
Uniprot ID/ACC: P08617 (POLG_HAVHM) Organism: Human hepatitis A virus genotype IB (isolate HM175) (HHAV) (Human hepatitis A virus (isolate Human/Australia/HM175/1976))
Gene Symbol: - Gene ID: 1493918
Protein Class: HYDROLASE
Ligand
Ligand Name:   N-(iodoacetyl)-L-valyl-L-phenylalaninamide
Canonical SMILES:   ICC(=O)N[C@@H](C(C)C)C(=O)N[C@H](C(=O)N)Cc1ccccc1
Standard InChI:   InChI=1S/C16H22IN3O3/c1-10(2)14(20-13(21)9-17)16(23)19-12(15(18)22)8-11-6-4-3-5-7-11/h3-7,10,12,14H,8-9H2,1-2H3,(H2,18,22)(H,19,23)(H,20,21)/t12-,14-/m0/s1
HET Code:   IVF PubChem:   53908297
DrugBank:   - ChEMBL:   -
Molecular Formula:   C16H22IN3O3 Mol. Weight:   431.0706 logP:   0.775
HBD:   3 HBA:   3
#Rotatable Bonds:   8 TPSA:   101.29
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Aliphatic Subsititution CYS 172 A 5.07 13.26 Halomethyl Carbonyl
Binding Affinity
-