PDB Entry (4lv3) |
||
| ||
PDB ID: 4lv3 | Resolution: 1.42 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 25344815 | DOI: 10.1038/nchembio.1666 | |
Protein |
|
Protein Name: Beta-lactamase | |
Uniprot ID/ACC: P00811 (AMPC_ECOLI) | Organism: Escherichia coli (strain K12) |
Gene Symbol: ampC | Gene ID: 948669 |
Protein Class: HYDROLASE |
Ligand |
||
Ligand Name: (3,5-di-tert-butylphenyl)boronic acid | ||
Canonical SMILES: OB(O)c1cc(C(C)(C)C)cc(c1)C(C)(C)C | ||
Standard InChI: InChI=1S/C14H23BO2/c1-13(2,3)10-7-11(14(4,5)6)9-12(8-10)15(16)17/h7-9,16-17H,1-6H3 | ||
HET Code: 25N | PubChem: 11470330 | |
DrugBank: - | ChEMBL: - | |
Molecular Formula: C14H23BO2 | Mol. Weight: 234.17911 | logP: 1.9614 |
HBD: 2 | HBA: 2 | |
#Rotatable Bonds: 1 | TPSA: 40.46 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Borylation | SER 64 | A | 13.74 | - | Boronic Acid |
Binding Affinity |
|
Database Name | Value |
PDBBind | Ki : 3200 nM |