PDB Entry (6af9) |
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PDB ID: 6af9 | Resolution: 1.39 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 30063823 | DOI: 10.1021/acschembio.8b00701 | |
Protein |
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Protein Name: Parkinson disease protein 7 | |
Uniprot ID/ACC: Q99497 (PARK7_HUMAN) | Organism: Homo sapiens (Human) |
Gene Symbol: PARK7 | Gene ID: 11315 |
Protein Class: HYDROLASE |
Ligand |
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Ligand Name: Isatin | ||
Canonical SMILES: c1cccc(c12)NC(=O)C2=O | ||
Standard InChI: InChI=1S/C8H5NO2/c10-7-5-3-1-2-4-6(5)9-8(7)11/h1-4H,(H,9,10,11) | ||
HET Code: ISN | PubChem: 7054 | |
DrugBank: DB02095 | ChEMBL: CHEMBL326294 | |
Molecular Formula: C8H5NO2 | Mol. Weight: 147.03203 | logP: 0.8214 |
HBD: 1 | HBA: 2 | |
#Rotatable Bonds: 0 | TPSA: 46.17 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Hemi(thio)acetalization | CYS 106 | A | 13.77 | 15.38 | Ketone |
Binding Affinity |
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Database Name | Value |
PDBBind | Kd : 3200 nM |