PDB Entry (1gth) |
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PDB ID: 1gth | Resolution: 2.25 Å | Exp. Method: X-RAY DIFFRACTION |
PMID: 11796730 | DOI: 10.1074/jbc.M111877200 | |
Protein |
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Protein Name: Dihydropyrimidine dehydrogenase [NADP(+)] | |
Uniprot ID/ACC: Q28943 (DPYD_PIG) | Organism: Sus scrofa (Pig) |
Gene Symbol: DPYD | Gene ID: 397109 |
Protein Class: OXIDOREDUCTASE |
Ligand |
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Ligand Name: 5-IODOURACIL | ||
Canonical SMILES: Ic1c[nH]c(=O)[nH]c1=O | ||
Standard InChI: InChI=1S/C4H3IN2O2/c5-2-1-6-4(9)7-3(2)8/h1H,(H2,6,7,8,9) | ||
HET Code: IDH | PubChem: 69672 | |
DrugBank: DB03554 | ChEMBL: CHEMBL1173 | |
Molecular Formula: C4H3IN2O2 | Mol. Weight: 237.92392 | logP: -0.3322 |
HBD: 2 | HBA: 2 | |
#Rotatable Bonds: 0 | TPSA: 65.72 |
Covalent Mechanism |
Reaction Name | Residue | Chain ID | SASA | pKa | Warhead Name | Warhead Structure |
Nucleophilic Aromatic Substitution | CYS 671 | A | 11.76 | 12.93 | Aryl Halide |
Binding Affinity |
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