PDB Entry (1gth)
PDB ID: 1gth Resolution: 2.25 Å Exp. Method: X-RAY DIFFRACTION
PMID: 11796730 DOI: 10.1074/jbc.M111877200
Protein
Protein Name: Dihydropyrimidine dehydrogenase [NADP(+)]
Uniprot ID/ACC: Q28943 (DPYD_PIG) Organism: Sus scrofa (Pig)
Gene Symbol: DPYD Gene ID: 397109
Protein Class: OXIDOREDUCTASE
Ligand
Ligand Name:   5-IODOURACIL
Canonical SMILES:   Ic1c[nH]c(=O)[nH]c1=O
Standard InChI:   InChI=1S/C4H3IN2O2/c5-2-1-6-4(9)7-3(2)8/h1H,(H2,6,7,8,9)
HET Code:   IDH PubChem:   69672
DrugBank:   DB03554 ChEMBL:   CHEMBL1173
Molecular Formula:   C4H3IN2O2 Mol. Weight:   237.92392 logP:   -0.3322
HBD:   2 HBA:   2
#Rotatable Bonds:   0 TPSA:   65.72
Covalent Mechanism
Reaction Name Residue Chain ID SASA pKa Warhead Name Warhead Structure
Nucleophilic Aromatic Substitution CYS 671 A 11.76 12.93 Aryl Halide
Binding Affinity
-